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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj2g3v1984620.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
bHLH |
Protein Properties |
Length: 366aa MW: 40746.8 Da PI: 5.89 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj2g3v1984620.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.6 | 6.8e-11 | 187 | 232 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
h ++ErrRR+++ +++ L l+P + kK++Ka++L A++Y+k L
Lj2g3v1984620.1 187 DHIIAERRRREKLSQSLIALAALIPGL-----KKMDKASVLGDAIKYVKVL 232
6999***********************.....9***************977 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MEKLNTPTEA SSSCWLSDLL LQEMDDCNFF QQCNPNLLGD EEFLSHDIVS AFQSDNLQQQ 60 QQPLSSESYS SYPVSNSETV WNSSTDETCF ERPAKQQKTK HVLPDQSNSS SPSSPTSQIL 120 SFENTHLYGL DCSLNPNLQN EGVSVSTPQL RNVNFPAQNR KGSTQNQNFE TITNPQGKGS 180 KKSHGQDHII AERRRREKLS QSLIALAALI PGLKKMDKAS VLGDAIKYVK VLKERLRLLE 240 EQNKNRAMES VVVVNKPQIS NDDNSSSSCD DGTIIGSEEA LPHVEARVSE KDVLLRLHCK 300 KQKGLLLKIL FEIQNLHLFV VNSSVLPFGD SILDITIVAQ MGAEYNLTIN ELVKNLRVAA 360 LRSMSS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 191 | 196 | ERRRRE |
2 | 192 | 197 | RRRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP010277 | 0.0 | AP010277.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjB71C07, BM2029, complete sequence. |
GenBank | FJ379757 | 0.0 | FJ379757.1 Lotus japonicus putative basic helix-loop-helix protein BHLH17 gene, complete cds. |