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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj2g3v1278950.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
bHLH |
Protein Properties |
Length: 213aa MW: 24543.3 Da PI: 5.4871 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj2g3v1278950.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 31.3 | 3.6e-10 | 47 | 90 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
e Er+RR+++ +++ Lr+l+P + ++Ka+i A+ YIk+Lq
Lj2g3v1278950.1 47 EYERKRREKLSTRLLMLRSLVPIV-----TNMNKATIIDDAITYIKELQ 90
77*********************8.....79*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0048658 | Biological Process | anther wall tapetum development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MGHVYDDRLT ISLEELGFNA ENGSNRGRMG RRSYDDDAKT FKSKNLEYER KRREKLSTRL 60 LMLRSLVPIV TNMNKATIID DAITYIKELQ DQVETLTREL LQETEATSKE VAKPKINDFD 120 LAEEMKKWGI QEEVHVTKID GNKLWVKMII ENKRGSFKKL VEFLDTYGIA LIDTNLTAMK 180 GALLITTCIQ GMDGQTLEVE QINQWLLDIL RAI
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 48 | 53 | ERKRRE |
2 | 49 | 54 | RKRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP010558 | 2e-49 | AP010558.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT03A02, TM1616, complete sequence. |