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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v1199890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 52aa MW: 6494.34 Da PI: 10.6841 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.1 | 8.2e-13 | 1 | 37 | 10 | 46 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +++NRe+ArrsR RK++ ++eL v L +eN+ L Lj2g3v1199890.1 1 MISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLV 37 68********************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 1.0E-11 | 1 | 40 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-10 | 1 | 36 | No hit | No description |
Pfam | PF00170 | 3.4E-10 | 1 | 38 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.07E-12 | 1 | 38 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 52 aa Download sequence Send to blast |
MISNRESARR SRMRKQKHLD ELWSQVVRLR TENHNLVDSE KNTSYWIFDR LY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 15 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v1199890.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY026054 | 1e-35 | AY026054.1 Phaseolus acutifolius bZIP mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013448026.1 | 1e-18 | basic leucine zipper 43 | ||||
Refseq | XP_028113468.1 | 1e-18 | basic leucine zipper 43-like | ||||
TrEMBL | A0A072TYW4 | 3e-17 | A0A072TYW4_MEDTR; BZIP transcription factor | ||||
TrEMBL | A0A445CZQ5 | 3e-17 | A0A445CZQ5_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA01G09510.1 | 6e-18 | (Glycine max) | ||||
STRING | XP_007157937.1 | 5e-18 | (Phaseolus vulgaris) | ||||
STRING | cassava4.1_026563m | 5e-18 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 5e-19 | basic leucine-zipper 58 |