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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj2g3v1058050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
NAC |
Protein Properties |
Length: 375aa MW: 42315.9 Da PI: 6.8955 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj2g3v1058050.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 174.9 | 2.3e-54 | 18 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
+pGfrFhPtdeelv +yLk+kv++k+l++ + ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+
Lj2g3v1058050.1 18 MPGFRFHPTDEELVGYYLKRKVQQKSLPV-DLIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSS 110
79***************************.99***************9888999**************************************** PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+ +glkk+Lvfy+gra kg ktdW+mhe+rl
Lj2g3v1058050.1 111 EGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 143
*******************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MELEVRSDME KIDDVMVMPG FRFHPTDEEL VGYYLKRKVQ QKSLPVDLIK QVDIYKYDPW 60 DLPKLASTGE KEWYFYCPRD RKYRNSARPN RVTRAGFWKA TGTDRPIYSS EGKCIGLKKS 120 LVFYRGRAAK GMKTDWMMHE FRLPCMPSDS AAPPKKLSDK SFSATDSWAI CRIFKKTNSL 180 SMVQKALSHP WISELPGGMV SDLLTQQGAN FNQFCSENIT TPSAIQFCGN TKQEQLHQIS 240 NANITNFSVS ASASASDIPA YKPIINSNTV TKSQQIPVSD GDLADNLMFY TLEPTGPTNP 300 DYIGFEEPSQ NYGGFSISLP QDMQPNITQV QLNQWESTVE RTIGFPFNLP SNEAWKSALA 360 SWDSPPCSTE MSTSF
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: First expressed at globular stage onward in the COL progenitors after the first division of the hypophyseal cell. Later observed in these cells and their descendants, mostly in direct daughter cells. Also detected in the Epi/LRC stem cells and daughters, and is retained in maturing LRC layers. Present in elongated stem cells that are about to divide. {ECO:0000269|PubMed:19081078}. |
Uniprot | TISSUE SPECIFICITY: Expressed in root cap stem cells and their immediate daughters. {ECO:0000269|PubMed:19081078}. |
Functional Description ? help
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Source |
Description |
UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP010571 | 0.0 | AP010571.1 Lotus japonicus genomic DNA, clone: LjT17J13, TM1835, complete sequence. |