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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj2g3v0906460.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
MYB |
Protein Properties |
Length: 277aa MW: 30530 Da PI: 5.6473 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj2g3v0906460.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.7 | 1.8e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd l+ + +++G+g +W + + + g++R++k+c++rw++yl
Lj2g3v0906460.1 14 RGPWSPEEDATLKSYLEKHGTGgNWIALPPKAGLNRCGKSCRLRWLNYL 62
89*********************************************97 PP
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2 | Myb_DNA-binding | 47.1 | 5.5e-15 | 71 | 111 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+T+eEde+++++ G++ W++Ia+ ++ gRt++++k++w++
Lj2g3v0906460.1 71 FTEEEDEIIYNLYSSIGSR-WSLIAAQFP-GRTDNDVKNHWNT 111
9******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MGRAPCCDKS SVKRGPWSPE EDATLKSYLE KHGTGGNWIA LPPKAGLNRC GKSCRLRWLN 60 YLRPHIKLGG FTEEEDEIIY NLYSSIGSRW SLIAAQFPGR TDNDVKNHWN TKLKKKFLAA 120 SSSTIVTGNT ISKTSCPDQF SAFTFQPQVD QAFFLDQKRN SACFVPNNVL DLEPAAIPVP 180 LTMPLETEAS SYTESSLGSN CNTPPFKEVS VFSSAPSLAE QNSHVQWYEN GHEGEDDGVF 240 LEFVLEDLLN HGFASLDKSS QVAPSSGNQD CSYSSKS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ902863 | 1e-120 | DQ902863.1 Glycine max transcription factor MYBJ6 mRNA, complete cds. |