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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj2g3v0777020.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
Trihelix |
| Protein Properties |
Length: 357aa MW: 41078 Da PI: 4.4572 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj2g3v0777020.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 47.2 | 5.7e-15 | 121 | 208 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
+Wt++ +l+L+e+ ++ +++r++l+ W ev++k+ e ++er+ qC + +++l++rykk+k++ + ss ++p+f++++
Lj2g3v0777020.1 121 EWTEHATLVLLEVWGDKFLQIGRNSLRSEEWHEVAEKVsDELKVERTVAQCMSVLDKLKRRYKKEKARIDEMgVGVSSCKWPFFKKMD 208
5*************************************8899*************************9998856778889*******8 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| Pfam | PF13837 | 3.2E-18 | 120 | 210 | No hit | No description |
| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MDDMEDDARY PPKSFPLSRQ NPSSHRHKHP NRAAPFHHRP PTTRYKVDEE DDEEFEDAKE 60
FDDYNDDDDA PENGYAGNFE EDDGFARKKR KLRGGPSNYE FAPRAKFPFG NRGGSSSAAE 120
EWTEHATLVL LEVWGDKFLQ IGRNSLRSEE WHEVAEKVSD ELKVERTVAQ CMSVLDKLKR 180
RYKKEKARID EMGVGVSSCK WPFFKKMDML MASSARQEYG LACGVDSGEY VFMNTRVYLN 240
RSNGFDEMRD SPGESETSEE NDSDGVAAGP GGDGDEEDDE TSYRVLADSI QKFGKIYEKI 300
ENTKRQQMME LEKMRLDFNR ELELQKKQIL ERAEAEIAKM QEVDEDETDS STENLSE
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 86 | 92 | RKKRKLR |
| 2 | 175 | 180 | DKLKRR |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Lja.5153 | 0.0 | cell culture| floral bud| protoplast| root |
