PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v0636680.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | G2-like | ||||||||
Protein Properties | Length: 420aa MW: 47241 Da PI: 7.2469 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 97.9 | 7.1e-31 | 235 | 288 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+L l+hvkSHLQ+YR+ Lj2g3v0636680.2 235 PRMRWTSSLHNRFVHAVELLGGHERATPKSVLELMDVKDLKLAHVKSHLQMYRT 288 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 6.27E-14 | 232 | 289 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.4E-27 | 233 | 289 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-22 | 235 | 288 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.6E-6 | 236 | 287 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence Send to blast |
MPQNLIPDLS LHISLPNSAP SSICTNERDD DSAFDIWRSS AEEEGEYGFK SHSDGSIKGS 60 SNIELSLGNP TSTTPSEAES PWRRSRNFVR ATQERQTTTN HGEVSEGVRR VITTPFNGIP 120 FYNSNNSSTE RVSSLYAPLP LPYPSCSPNN DATVGGVSVT PISRFNGITM ENLRPNQQFQ 180 YLNHHHHHQQ QLLHNHHQNQ QQFGTNGVSD FANGFMRSRM FNTPKLQSKR NMRAPRMRWT 240 SSLHNRFVHA VELLGGHERA TPKSVLELMD VKDLKLAHVK SHLQMYRTVK NTDKPAASSD 300 GDEDFISLTP PPINQSKNNY LPNQRGPLNA PQSHDDMAHT SSNLWANSSS SSIGERIQAI 360 SRDLDELSRE ESLSSQHIGK LTEERNYIQS RSFKDQSLAC QNPSLEFTLG RPNWHINEHA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-16 | 236 | 290 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-16 | 236 | 290 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-16 | 236 | 290 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-16 | 236 | 290 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-16 | 236 | 290 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.20532 | 0.0 | pod |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v0636680.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027359217.1 | 1e-160 | transcription repressor KAN1-like isoform X2 | ||||
TrEMBL | A0A151RF88 | 1e-154 | A0A151RF88_CAJCA; Putative Myb family transcription factor At1g14600 family | ||||
STRING | GLYMA07G12070.1 | 1e-145 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1756 | 33 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 2e-46 | G2-like family protein |