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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v0463790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 23691.3 Da PI: 7.5694 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.5e-12 | 24 | 72 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h e E++RR+++ + +Lr+llP ++K s ++ + +A++YI++Lq Lj2g3v0463790.1 24 HRETEKQRRQEMGKLCTTLRSLLPLeY---IKGKRSTSDHVNEAINYINHLQ 72 99***********************77...*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 3.77E-12 | 17 | 76 | No hit | No description |
SuperFamily | SSF47459 | 3.79E-16 | 18 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.668 | 19 | 71 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.4E-11 | 22 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.5E-9 | 24 | 72 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.4E-5 | 25 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MLIWEKKIIN KKIAMDDENK KWIHRETEKQ RRQEMGKLCT TLRSLLPLEY IKGKRSTSDH 60 VNEAINYINH LQNKVKQLQY KRDKLMKEVP NLHTTTGPEN ECSPTHLQPF VIVHPFPGGV 120 EIVCSYSLKC VFPLSRVLDI LLKEGLDVVS STSTKIDERF IHTIISEDPS HLNILDTDYS 180 DQLQRKLTEA ISSTGVGETL PEPQIC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v0463790.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017439389.1 | 9e-89 | PREDICTED: transcription factor bHLH36-like isoform X2 | ||||
TrEMBL | A0A0S3TB41 | 2e-87 | A0A0S3TB41_PHAAN; Uncharacterized protein | ||||
STRING | GLYMA16G32610.3 | 4e-86 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF792 | 33 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 5e-36 | bHLH family protein |