|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj1g3v4863050.1 |
Common Name | LjMYB12 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
MYB |
Protein Properties |
Length: 326aa MW: 37392.5 Da PI: 5.0079 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj1g3v4863050.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.7 | 4e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rgrWT+eEdell ++++ G g+W++ ++ g+ R++k+c++rw +yl
Lj1g3v4863050.1 14 RGRWTAEEDELLTKYIQASGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
8*******************************99************97 PP
|
2 | Myb_DNA-binding | 54.9 | 2e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ + eE+ l+v++++ +G++ W++Ia++m+ gRt++++k++w+++l
Lj1g3v4863050.1 67 RGNISDEEESLIVKLHASFGNR-WSLIASHMP-GRTDNEIKNYWNSHL 112
7899******************.*********.************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MGRAPCCEKV GLKRGRWTAE EDELLTKYIQ ASGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRGDLKRGNI SDEEESLIVK LHASFGNRWS LIASHMPGRT DNEIKNYWNS HLSRKLVYTF 120 RGSTTKSIVD TPPKRRRCGR TSRWAMKKNK TYSLINNDLQ NQNNELEKED PVARCDVKGS 180 DDILCQEAIN VDDDVLSFHE FMDTCLMEPS GDHDVDEERE SAVMNDGGSE GVRDTCSTVD 240 TVVTSRDSQS KSENHKLHNS CSSNSLGYSS GLDSVMEMNR EDESSVLSRE QNENLLTWLW 300 EDEDWEKDFQ IVDPEKHNDM LYWFLS
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AB334529 | 0.0 | AB334529.1 Lotus japonicus LjMYB12 mRNA for MYB-related protein, complete cds. |