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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj1g3v4252330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
C2H2 |
| Protein Properties |
Length: 290aa MW: 32015.3 Da PI: 8.4568 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj1g3v4252330.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11 | 0.0013 | 225 | 247 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp C+ Fs+ L+ H ++ H
Lj1g3v4252330.1 225 QCPQCSAKFSSVTALVDHVQKvH 247
7******************9988 PP
|
| 2 | zf-C2H2 | 12.2 | 0.00055 | 263 | 284 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23
Cp+C+k F ++ +L+ H + H
Lj1g3v4252330.1 263 CPKCSKGFLDPVSLVEHVERdH 284
*****************99888 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF118310 | 1.9E-10 | 5 | 59 | No hit | No description |
| PROSITE profile | PS51039 | 7.982 | 7 | 56 | IPR000058 | Zinc finger, AN1-type |
| Gene3D | G3DSA:4.10.1110.10 | 7.8E-10 | 11 | 53 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 2.1E-4 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 2.5E-13 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
| Gene3D | G3DSA:4.10.1110.10 | 2.0E-9 | 91 | 150 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 3.14E-8 | 93 | 143 | No hit | No description |
| PROSITE profile | PS51039 | 7.705 | 98 | 147 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00355 | 140 | 99 | 129 | IPR015880 | Zinc finger, C2H2-like |
| SMART | SM00154 | 0.047 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 1.2E-7 | 101 | 141 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS50157 | 8.683 | 224 | 252 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.0094 | 224 | 247 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13894 | 3.7E-4 | 225 | 247 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 226 | 247 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 8.808 | 261 | 289 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 14 | 261 | 284 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 263 | 284 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MGTAEFPDLC KHCSVADCKL IDFLPFSCDR CNQVYCLEHR SYIKHQCTKA DKRDVTVVIC 60
PLCAKGVRLI PEQDPNITWE NHVNTDCDPS NYEKATKKIK CPVPGCREIL VFSNTIKCRD 120
CLVDHCLKHR FGPDHKCSGP KKLETSFSFM SFMNRSRKDA PKPNLTSSSS SNWTTSFLNM 180
ASNIRASAEA SISKLSGETN QAMQTSRGGV GQSSGSGNRN YQAEQCPQCS AKFSSVTALV 240
DHVQKVHERS GNRSGVKKTI DACPKCSKGF LDPVSLVEHV ERDHGGSSRA
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| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in environmental stress response. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, dehydration and salt stress. {ECO:0000269|PubMed:17033811}. |
