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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj1g3v3978270.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
LBD |
Protein Properties |
Length: 222aa MW: 23760.7 Da PI: 7.8689 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj1g3v3978270.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 125.5 | 2.6e-39 | 44 | 145 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C aCk+lrrkC ++Cv+apyf ++q +++fa+vhk+FGasnv+kll ++p ++r++a++++ yeA+ar++dPvyG+v++il+lqqq+++l+ e
Lj1g3v3978270.1 44 PCGACKFLRRKCINGCVFAPYFGSDQgAARFAVVHKVFGASNVSKLLLHVPVNRRHEAVATISYEAQARLSDPVYGCVSTILALQQQVASLQGE 137
7***********************9989****************************************************************** PP
DUF260 94 lallkeel 101
l++++++l
Lj1g3v3978270.1 138 LSMVQTQL 145
***99875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:1900150 | Biological Process | regulation of defense response to fungus |
Sequence ? help Back to Top |
Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MAEPQVSNSS DHATSSSSGA RRKGTVSKRG GMTITTTTAQ GGAPCGACKF LRRKCINGCV 60 FAPYFGSDQG AARFAVVHKV FGASNVSKLL LHVPVNRRHE AVATISYEAQ ARLSDPVYGC 120 VSTILALQQQ VASLQGELSM VQTQLMNSRF AYASVLQQQQ QPNINVAMHP AYSNNSSAST 180 NIMNMSCFNP AGFDLSMETA APSSHSFEPL QLSHLSHDEE DD
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots and flowers. {ECO:0000269|PubMed:12068116}. |