 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj1g3v3024170.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
TCP |
Protein Properties |
Length: 376aa MW: 42056.7 Da PI: 8.4567 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj1g3v3024170.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 106.9 | 3.2e-33 | 59 | 186 | 2 | 115 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasec..eaes 77
g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ akpai+el+ + s +++
Lj1g3v3024170.1 59 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNVAKPAIDELPPLpnfpqpgnftfsgypsS------LitPHHH 146
689*************************************************************87777777666533330......1333333 PP
TCP 78 ssssasnsssg.............kaaksaakskksqksaasalnlakesr 115
+ ++as+s+++ + + s+++ n++++ +
Lj1g3v3024170.1 147 EANTASQSNEQlqfheregtsvrgQ-----------KMSKEQLFNINRSGN 186
3333333333333322223333331...........222222233333222 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MRDTQDDYKI PKEADNIPLK LEGHSSDDHE KPKPPSASTS PAQWSRLKDP RIVRVSRAFG 60 GKDRHSKVCT IRGLRDRRVR LSVPTAIQLY DLQDRLGLNQ PSKVVDWLLN VAKPAIDELP 120 PLPNFPQPGN FTFSGYPSSL ITPHHHEANT ASQSNEQLQF HEREGTSVRG QKMSKEQLFN 180 INRSGNVDQW EGSSQNSMWK LKAKEVSEEL VTDKENWMNK QGSNNNEGGS AHVLPNNLQR 240 ANHYPSFLGL LNNMPLGYAY NQWENSGGVN SQLGGNHGFS NQTNISVVPF PSTLALSTGN 300 SQISQSYIPS HVTAMDVDQR QINHYQMLSL SSQNLLVNNS LNPSFSLAMM TPRLLHSPNS 360 NENPSSSHRD QDFTSK
|