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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lj1g3v2953600.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
WRKY |
| Protein Properties |
Length: 529aa MW: 58147.1 Da PI: 7.9909 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj1g3v2953600.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.4 | 3.8e-30 | 211 | 270 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+a+d +++++tYeg+Hnh+
Lj1g3v2953600.1 211 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCADDLSILITTYEGTHNHP 270
58***************************99****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006952 | Biological Process | defense response |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 529 aa
Download sequence Send
to blast |
MSKNSSPSGS EIEEKRVTSV FLDDGFSNQE VKKVERLKSA KAEMGEVKEE NERLKMMLNQ 60
VEKDYHSLQL RFFDILHKEV SNKGVAENSP TPHDHENEEP ELVSLCLGRG PRESKKGAII 120
EKLNQPREKE DVEVNLSLGL ESKYLLSMEV VSDLSPVNSS EELPKEVELA EGTLKTNKSA 180
KVVNVNDDIS DQMPAKKARV SVRARCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA 240
PACPVRKQVQ RCADDLSILI TTYEGTHNHP LPVSAAAIAS TTSAAASMLL SGSSTSHHAG 300
YTSALSGLSF NQQFGEQRAK HAFLPPNQAS HLFPTVTVDL TSSNNMASSN QRFSPNSLSF 360
CSPHEPNFTH SNVWGNKGFP NNGTLRPLNH FQEHNFYHQQ CMTTNQTSNS LAETITKAIS 420
TDPSLHSVIA AAVSSLVGPS GNQKPGLNLK LGQHHDHQLV SSNLLNQNNG KGCINGYFKR 480
LTSANSQARN FMLLKPTLPF SVSNSSTGTS PSIVNQIKHN YDPDMNTHH
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP006425 | 0.0 | AP006425.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT39B10, TM0315, complete sequence. |
