PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v2216450.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 168aa    MW: 18830.3 Da    PI: 10.2757
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v2216450.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.53.5e-1496147354
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                      +++r +r  kNRe+A rsR+RK+a+ + Le k + L++eN++Lk+ + el+ 
  Lj1g3v2216450.1  96 SDQRRKRILKNRESALRSRARKQAYKKGLEMKLALLTEENSRLKSHVAELQL 147
                      5799*****************************************9999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-1194158IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.9E-1296150No hitNo description
PROSITE profilePS5021710.92196153IPR004827Basic-leucine zipper domain
PfamPF001701.2E-1197146IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-1098147No hitNo description
CDDcd147075.79E-1698151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MDPSPCNCWN HFTKPPSPTP SSSSEVWKDL KLSSLCDSSM EMEASSPWLS LCPASSVFQK  60
QSHQHHSMLS SFNTSFDASS SSGEKIAQQD RVYAFSDQRR KRILKNRESA LRSRARKQAY  120
KKGLEMKLAL LTEENSRLKS HVAELQLRLS SAKPAKGGAV YRTMSSPF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.259650.0root
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v2216450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1390770.0BT139077.1 Lotus japonicus clone JCVI-FLLj-5B8 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001236963.11e-36bZIP transcription factor bZIP46
RefseqXP_028227447.11e-36protein FD-like
TrEMBLI3SF301e-117I3SF30_LOTJA; Uncharacterized protein
STRINGGLYMA04G02420.14e-36(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1633979
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.18e-14bZIP family protein