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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj1g3v2140900.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
SRS |
Protein Properties |
Length: 270aa MW: 29397.8 Da PI: 8.2944 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj1g3v2140900.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 174.7 | 4.5e-54 | 78 | 207 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaes 96
g+++CqdCGnqakkdCah RCRtCCk+rgf C+thvkstW+paakrrerq +++ +kr+ + + s s
Lj1g3v2140900.1 78 GGGVNCQDCGNQAKKDCAHLRCRTCCKTRGFPCQTHVKSTWIPAAKRRERQLLRGGE--------DNNVPKRHSS---NPPS-----------S 149
5789*********************************************97655543........2222333322...1222...........2 PP
DUF702 97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
++ le+ ++P+ev+s+avfrcvrvs+v+ +ee +aYqt v+igGhvfkGiLydqG+e+
Lj1g3v2140900.1 150 TTGLEAGQFPTEVNSTAVFRCVRVSGVECAEERCAYQTCVNIGGHVFKGILYDQGPES 207
23467789************************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MAGLFSLGPQ NKLEVEKEES SVLWFRNEEI YNNNNKGFEI WPPQQNLLNY NNEEITSLCE 60 AASRRRFGMM MSRRGGGGGG VNCQDCGNQA KKDCAHLRCR TCCKTRGFPC QTHVKSTWIP 120 AAKRRERQLL RGGEDNNVPK RHSSNPPSST TGLEAGQFPT EVNSTAVFRC VRVSGVECAE 180 ERCAYQTCVN IGGHVFKGIL YDQGPESSYT TSTVVGEGSS AGGGGAKQLG FVTATNTATT 240 SGNPYFDPSL YPAPLNAFMA GTHFFPPSRS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP006110 | 0.0 | AP006110.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT39G11, TM0195b, complete sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G51060.1 | 1e-62 | Lateral root primordium (LRP) protein-related |