 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj1g3v2035130.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
NAC |
| Protein Properties |
Length: 383aa MW: 42254.8 Da PI: 8.6457 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj1g3v2035130.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 176.7 | 6.6e-55 | 29 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrFhPtdeel+++yL +k+++++++ ++i++vd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++
Lj1g3v2035130.1 29 LPPGFRFHPTDEELITCYLINKISDSSFTG-KAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN 121
79*************************999.88***************99999****************************************9 PP
NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++elvg+kktLvfykgrap+gek++Wvmheyr+
Lj1g3v2035130.1 122 SvTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRI 156
989999***************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MQKEKEVIIK EGTETTEMEG SHGGKEETLP PGFRFHPTDE ELITCYLINK ISDSSFTGKA 60
ITDVDLNKCE PWELPGKAKM GEKEWYFFSL RDRKYPTGVR TNRATNTGYW KTTGKDKEIF 120
NSVTSELVGM KKTLVFYKGR APRGEKSNWV MHEYRIHSKS TFRTNKQDEW VVCRVFKKSA 180
GAKKFPTSNH TRAVLNPYSL ELAPNMMPPP MMQLASDPSA AHFLYGRNYM GNTAELAEIA 240
RVLRGGGSSS GFNLQPMVQQ SQLNCYPVPA VGGAGGGGFT ISGLNLNLGG GGGAVASQPV 300
LRPMLQPSQQ PHPAQTMAQV MLHDVSSNMM TGNPLGAEII NNGGYGGGTE MSNVTNNNHH 360
GHGNRYNMGM EHCVDLENYW PSY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-57 | 20 | 184 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-57 | 20 | 184 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-57 | 20 | 184 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-57 | 20 | 184 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-57 | 20 | 184 | 1 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-57 | 20 | 184 | 1 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP009709 | 0.0 | AP009709.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT35C22, TM1767, complete sequence. |
