 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lj1g3v1265910.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
Trihelix |
| Protein Properties |
Length: 507aa MW: 57341.8 Da PI: 6.2265 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj1g3v1265910.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 93.9 | 1.5e-29 | 53 | 139 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+++e++aL+++r+em+ ++r+++ k+plWe+vs+k++e g++rs+k+C+ek+en+ k+++++keg+ +r+++s +t+++f+qlea
Lj1g3v1265910.1 53 RWPREETMALLRIRSEMDVAFRDTSPKAPLWEQVSRKLAELGYHRSAKKCREKFENIYKYHRRTKEGRFGRANNSGKTYRFFEQLEA 139
8************************************************************************************85 PP
|
| 2 | trihelix | 97.5 | 1.2e-30 | 341 | 430 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrr....gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k+ev aLi++r++++ +++ +++k+plWee+s++m++ g+ rs+k+Ckekwen+nk++k++ke +k++ +++s+tcpy+++lea
Lj1g3v1265910.1 341 RWPKEEVEALIRLRTQLDVQSQGnnngSNSKGPLWEEISSAMKSIGYDRSAKRCKEKWENINKYFKRMKEKNKRK-PTDSKTCPYYHHLEA 430
8**************99988885223357********************************************96.99**********985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MLGISSLPET PIQTPPPHLV QEVAAAATDG GPLSDGFKTE HGEDGDRSSG ANRWPREETM 60
ALLRIRSEMD VAFRDTSPKA PLWEQVSRKL AELGYHRSAK KCREKFENIY KYHRRTKEGR 120
FGRANNSGKT YRFFEQLEAL EGNLVHPPSS SEGQQHHVQL QPDSNVDVIQ DAVPCSFRFP 180
GANVVEYSSS ATCSSGEGGE KGKKKRKLTR FFEGLMREVI ERQETLQRKF MEVLDKCEME 240
RVAREEAWKV EELARIQRER EVLAQERAIS AAKDEAVLAL LKKITENSAD GTVQLPEKFY 300
VIPDENANGN VNGEGEKQHQ EGGNANVGVN VGSFIHMSSS RWPKEEVEAL IRLRTQLDVQ 360
SQGNNNGSNS KGPLWEEISS AMKSIGYDRS AKRCKEKWEN INKYFKRMKE KNKRKPTDSK 420
TCPYYHHLEA LYSKKPKKVD DSGSSGNELK PEELLMHIMG SHGERQQLES SSEDGDRENM 480
EQNQGDNDED QDEYQMVDNS PSTGIMS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EF221753 | 2e-66 | EF221753.1 Glycine max trihelix transcription factor (GT-2A) mRNA, complete cds. |
