 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj1g3v1091120.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
NAC |
| Protein Properties |
Length: 622aa MW: 70311.9 Da PI: 4.5717 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj1g3v1091120.2 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 158.3 | 3.1e-49 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lp GfrF+P+de++++ yL++k++++ ++ vi+e+d++k+ePw+Lp + +++++ ew+fF++ d+ky++g+r +rat +gyWkatg d+++
Lj1g3v1091120.2 16 LPLGFRFQPSDEDIIDLYLRQKINNNGDDV-WVIREIDVCKWEPWELPdfSVIRNKDPEWFFFCPLDRKYPNGNRLKRATGHGYWKATGIDRKI 108
699************************999.89***************6437777888************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+s +++l+g+kktLvfy+grapkg++t+Wvmheyr
Lj1g3v1091120.2 109 KS-GSSLIGMKKTLVFYHGRAPKGKRTNWVMHEYRT 143
**.99*****************************96 PP
|
| 2 | NAM | 153.1 | 1.2e-47 | 240 | 366 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lp +rF+P+dee++++yL++k++g+ ++ vi+e+d++k+ePwdLp + +++++ ew+fF+++d+ky++g+ nrat++g+Wkatg+d++v
Lj1g3v1091120.2 240 LPIAIRFRPSDEEIIDFYLRQKINGNGDDV-WVIREIDVCKWEPWDLPdlSVIRNKDPEWFFFCPQDRKYPNGNLVNRATEHGFWKATGRDRKV 332
57889**********************999.89**************96447777888************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127
+s +++l+g+kktLvfy+grap+g++t+Wvmhey+
Lj1g3v1091120.2 333 KS-GSSLIGIKKTLVFYNGRAPRGKRTNWVMHEYQ 366
**.99*****************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 622 aa
Download sequence Send
to blast |
MGVVETAMPV LSLNSLPLGF RFQPSDEDII DLYLRQKINN NGDDVWVIRE IDVCKWEPWE 60
LPDFSVIRNK DPEWFFFCPL DRKYPNGNRL KRATGHGYWK ATGIDRKIKS GSSLIGMKKT 120
LVFYHGRAPK GKRTNWVMHE YRTTLQELDG TNPGQNPYVI CRLFKKHDES IEVSNCGEVE 180
QTASTPIAAK YCPEEVQSDT PLPVVALSSS LLTENVKPKP IIPETSEETT SKPVLSLNSL 240
PIAIRFRPSD EEIIDFYLRQ KINGNGDDVW VIREIDVCKW EPWDLPDLSV IRNKDPEWFF 300
FCPQDRKYPN GNLVNRATEH GFWKATGRDR KVKSGSSLIG IKKTLVFYNG RAPRGKRTNW 360
VMHEYQPTLQ ELDGTNPGQN PYVICRLFKK QDESIEVSNC GEVEKTASTP MAAKYSPEDV 420
QSDTPLPPVA VSSSLLTEDK TQAIIRETSE ETTSNIITPV DRNSDEYDAH NAQPQNVKLA 480
LEENQLLNSD IFSDLENDLF DDILFSPALV HLPQVFDYQA SNEPDGLSGL QYGTNETGIS 540
DLFESLTSDQ LSYEETGSQP MNYPLFNVKD SGWGSDSDLK VTNMPSMQVP YPEEAMDRNV 600
PLGTAPEFFS TVGVPFDHSA VE
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-42 | 1 | 394 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-42 | 1 | 394 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-42 | 1 | 394 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-42 | 1 | 394 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 3e-42 | 1 | 394 | 7 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 2e-42 | 1 | 394 | 4 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 2e-42 | 1 | 394 | 4 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Induced during normal senescence. {ECO:0000269|PubMed:18443413}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers (PubMed:17158162). Expressed in guard cells (PubMed:18443413). {ECO:0000269|PubMed:17158162, ECO:0000269|PubMed:18443413}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP009658 | 0.0 | AP009658.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT41E18, TM0207, complete sequence. |
