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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj1g3v0559150.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
TCP |
Protein Properties |
Length: 357aa MW: 39859.2 Da PI: 9.6786 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj1g3v0559150.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 90.1 | 4.7e-28 | 53 | 132 | 3 | 83 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83
g+kdrhsk++T +g+RdRR+Rls+++a +++dLqd+LG+ ++sk ++WLl++ k i++l+ +++++ + ++ss++++
Lj1g3v0559150.1 53 GGKDRHSKVCTIRGLRDRRIRLSVPTAVQLYDLQDKLGLNQPSKVVDWLLEATKLDIDKLPPLQFPQGFSQ-FHDSSNASD 132
79*************************************************************88877332.222222222 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MMASSREVHE SKQEGDDETF NIPRLTKASS SSIPRQWSGF KNPRIVRVSR SFGGKDRHSK 60 VCTIRGLRDR RIRLSVPTAV QLYDLQDKLG LNQPSKVVDW LLEATKLDID KLPPLQFPQG 120 FSQFHDSSNA SDLSLGPFYD YTNNFMAKSR FSWDLDSMSR VNKGKEAAER GKWIKTSYDH 180 ENRDGVIGSV GVGGGYNNSF QVSTQKLFPN TMSYNNNNYH SSEPSSLSLS QFGSHGGLFH 240 SHSQLDPSHP SSVQFPSSNL PLLSGSQFLF APTSSVPTPP SFFTPFMTTT TTSVENDPRQ 300 FNHFQFLNSS GSSQHLPHPL FPSLHSLNST PIRPFATPFN SKLLDSNNDN KDSNTRS
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G60970.1 | 2e-50 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |