PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0350599.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 157aa    MW: 17995.3 Da    PI: 4.4927
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0350599.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.4e-1095136445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      +k+++r ++NR +A +sR+RKk ++++Le k+   e+e ++L
  Lj0g3v0350599.1  95 SKKQIRQMRNRDSAVKSRERKKLYVKNLEMKSRYYEGECRRL 136
                      79****************************998888877666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.7E-795133IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-996137No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-996136No hitNo description
CDDcd147041.29E-1097137No hitNo description
PROSITE patternPS000360100114IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MDTSEQLDWE AFLEFEVDDF FMDAPPPSLA VGSSPDPVLS EIENLLMDDE PAVLPSESED  60
YDKLLAEILA EPHPHSDNSR VEPPTPEEAS NETVSKKQIR QMRNRDSAVK SRERKKLYVK  120
NLEMKSRYYE GECRRLAMLR IARCGFVCNR VAHLVLP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.135350.0cell culture| protoplast
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0350599.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1388260.0BT138826.1 Lotus japonicus clone JCVI-FLLj-17J20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013467378.13e-43bZIP transcription factor 60
TrEMBLI3SEC99e-94I3SEC9_LOTJA; Uncharacterized protein
STRINGXP_004514723.15e-40(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-08basic region/leucine zipper motif 60