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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj0g3v0346819.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
NAC |
| Protein Properties |
Length: 340aa MW: 38247.1 Da PI: 7.8825 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj0g3v0346819.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.7 | 6.8e-51 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrF Ptdeel+v+yL++kv+g +++l +i+e+d+yk++Pw Lp k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++
Lj0g3v0346819.1 14 LPPGFRFFPTDEELLVQYLCRKVAGYHFSL-PIIAEIDLYKFDPWVLPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT 106
79**************************99.88***************7767799*************************************99 PP
NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
+g++vg+kk Lvfy g+apkg+kt+W+mheyrl
Lj0g3v0346819.1 107 -EGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRL 139
.999****************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MGVPEKDPLA QLSLPPGFRF FPTDEELLVQ YLCRKVAGYH FSLPIIAEID LYKFDPWVLP 60
GKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY 120
IGKAPKGTKT NWIMHEYRLL DSSRKHKLGS SRLDEWVLCR IYKKKSSTQK EAAATFSSKE 180
CSYGSSSPST SSHVEDMLES LPEIDDRCFA LPRVNSLRTL QQDEKLGSAT GIFTDWGNPT 240
DLDTVPEFVP GSQAQWMGNY SCNDLYVPSV PQFGHVDWSA TTRNTAEEEV QSGVRTHRVA 300
ESSGFYQQNP DLTTQRLLPG SVDPFGFGYL GQQTGFGFRD
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-104 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-104 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-104 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-104 | 1 | 170 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-104 | 1 | 170 | 7 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-104 | 1 | 170 | 4 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-104 | 1 | 170 | 4 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Lja.6140 | 0.0 | floral bud| flower| pod| protoplast| root |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in guard cells of the epidermis. {ECO:0000269|PubMed:25005917}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}. |
