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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj0g3v0329239.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
MYB |
Protein Properties |
Length: 346aa MW: 39310.9 Da PI: 6.7454 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0329239.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.6 | 2.1e-16 | 108 | 153 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++
Lj0g3v0329239.1 108 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 153
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 56 | 9.4e-18 | 160 | 203 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+
Lj0g3v0329239.1 160 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 203
678*******************.*********.***********96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MVYADMVSLS LNSNFSNVSS SQESNHACKG SGLESGSTNW TFPFMRECLP RSFEEENPNM 60 DDVEAKSSDC SDEAGETNHN ADFNEENPNE NPSICKEGDS GQSKLCARGH WRPAEDSKLK 120 ELVALYGPQN WNLIAEKLEG RSGKSCRLRW FNQLDPRINR RAFSEEEEER LMQAHRIYGN 180 KWAMIARLFP GRTDNAVKNH WHVIMARKYR EQSNAYRRRR LNNQSVHKRT TDHQQNQTLA 240 CRSDSTTELT EHHASSHYLL NGSVLNNNNM AVELTTHMSG SGSRNQAPPH VIEAILTWWE 300 SLSVISEAGT VLVMNFIIII TINNIINIIN NIIKCLVSTH IIPNNI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 8e-78 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |