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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj0g3v0303659.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
Trihelix |
| Protein Properties |
Length: 652aa MW: 71724.5 Da PI: 6.8119 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj0g3v0303659.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 90.2 | 2.2e-28 | 62 | 145 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++qe+laL+++r++m+ ++r+++ k+plW+evs+k+++ g++r++k+Ckek+en+ k++k++keg+++++ + +t+++fdql+
Lj0g3v0303659.1 62 RWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLADLGYHRNAKKCKEKFENVYKYHKRTKEGRSGKS--DGKTYRFFDQLQ 145
8********************************************************************964..5557******98 PP
|
| 2 | trihelix | 102.9 | 2.5e-32 | 471 | 555 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+k ev aLi++r++++++++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf+ql+
Lj0g3v0303659.1 471 RWPKAEVEALIKLRTSLDTKYQDSGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHQLD 555
8*********************************************************************8.99999*******98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010192 | Biological Process | mucilage biosynthetic process |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 652 aa
Download sequence Send
to blast |
MLGDSAVLGT AGGGGSSGDA AVAAAAAAAR AHDGGDTAAG GGGGGSNSGD DERGDRSFGG 60
NRWPRQETLA LLKIRSDMDV AFRDASVKGP LWDEVSRKLA DLGYHRNAKK CKEKFENVYK 120
YHKRTKEGRS GKSDGKTYRF FDQLQALENN PSIQSPTAPK PPQQQTASLP AILSPTPSKL 180
PKQTPPPATT PALSSLSLPT TTVPLPLPPT LVNTIPSTTS ITVPSIAPSY PPSNPSFFPS 240
TTNPPHTITP PSFPNIPTDL LSDYSTSSTS SDETMMEAGG TRKRKRKWKD FFERLMKEVM 300
EKQEQLQKRF LEAIEKREQE RTAREEAWKM QEMQKINRER EILAQERSIA AAKDAAVMTF 360
LQKISEQQNL TPTSNNNNNN AQQPQDPAPA PSPAPVPVPV PVSVPAPVQT PILVAQQITA 420
APVPQAPQPL APQEVPQQHQ HHQVQQQVTN LEMIKGDNGE SVGVMPASSS RWPKAEVEAL 480
IKLRTSLDTK YQDSGPKGPL WEEISALMRK MGYNRNAKRC KEKWENINKY FKKVKESNKK 540
RPEDAKTCPY FHQLDSLYRE KSKMMESSLM KPESAAAATA MMAPLMVRPE QQWPPQPVPD 600
VTMVDAGSDR RHSEEEDYDD DNDYDDKDIG DEDEDDEGTG KYEIVASKPA PR
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
