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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj0g3v0283229.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
bHLH |
| Protein Properties |
Length: 160aa MW: 18054.9 Da PI: 9.9863 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj0g3v0283229.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 45 | 2e-14 | 10 | 56 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++h e+Er+RR+++N++f Lr+ +P+ K++Ka+ L Av YI++L
Lj0g3v0283229.1 10 VNHVEAERQRREKLNQKFYALRSAVPTV-----SKMDKASLLSDAVSYINEL 56
589************************6.....5****************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 160 aa
Download sequence Send
to blast |
MFRRGGQFSV NHVEAERQRR EKLNQKFYAL RSAVPTVSKM DKASLLSDAV SYINELKAKI 60
NCLERGLENR AESSKQETSE DVKTVAVDVK ILGTEAIISV QSLNVNYPIA RLMDAIRDLR 120
LKILHATMSN VKEMMLQDVV VKAPHGMNEE AIKNAITQRL
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5gnj_A | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_B | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_E | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_F | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_G | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_I | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_M | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| 5gnj_N | 1e-24 | 5 | 60 | 2 | 57 | Transcription factor MYC2 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Highly expressed in trichomes and at lower levels in leaves and flowers (PubMed:24884371). Expressed at low levels in roots, stems, leaves, flowers and fruits (PubMed:15231736). {ECO:0000269|PubMed:15231736, ECO:0000269|PubMed:24884371}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-AACGTG-3') found in a number of promoters of jasmonate-induced genes (PubMed:15231736). Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:30518626). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). Acts synergistically with EOT1 in the transactivation of TPS5 (PubMed:24884371). Involved in type VI glandular trichome development (PubMed:30518626). Involved in the activation of terpene synthases required for volatile mono- and sesquiterpenes synthesis by the glandular cells of type VI trichomes (PubMed:30518626). {ECO:0000269|PubMed:15231736, ECO:0000269|PubMed:24884371, ECO:0000269|PubMed:30518626}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by methyl jasmonate and wounding. {ECO:0000269|PubMed:15231736}. |
