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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj0g3v0282189.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
bHLH |
Protein Properties |
Length: 216aa MW: 24456.9 Da PI: 5.9284 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0282189.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 34.2 | 4.4e-11 | 65 | 112 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ rE++RR+++N++f eL ++l + + K +K +iL A++ +++L
Lj0g3v0282189.1 65 TKACREKQRREKLNERFCELSSVLEPG---RPVKTDKPAILDDAIRVLSQL 112
6789**********************8...89*****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MDSLEDSGCW DFLDYSFLDP PPTDFLWSNP NQSVIAEADF PSVAVASQEN TRKRGRTDSC 60 CKAGTKACRE KQRREKLNER FCELSSVLEP GRPVKTDKPA ILDDAIRVLS QLKTEAQELK 120 ETNEKLLEEI KCLKAEKNEL REEKLVLKAD KERIEKKLKA LPVSAGGFLP PPMAAYQPTV 180 NKMAVYPNYG YIPMWQYLPS SARDTSHDHE LRPPAA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT141732 | 1e-168 | BT141732.1 Lotus japonicus clone JCVI-FLLj-20B1 unknown mRNA. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Li X,Zhang H,Ai Q,Liang G,Yu D
Two bHLH Transcription Factors, bHLH34 and bHLH104, Regulate Iron Homeostasis in Arabidopsis thaliana. Plant Physiol., 2016. 170(4): p. 2478-93 [PMID:26921305] - Liang G,Zhang H,Li X,Ai Q,Yu D
bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana. J. Exp. Bot., 2017. 68(7): p. 1743-1755 [PMID:28369511] - Wang C,Yao X,Yu D,Liang G
Fe-deficiency-induced expression of bHLH104 enhances Fe-deficiency tolerance of Arabidopsis thaliana. Planta, 2017. 246(3): p. 421-431 [PMID:28451750] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Min JH, et al.
Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element. Front Plant Sci, 2017. 8: p. 2100 [PMID:29321786] - Min JH, et al.
A basic helix-loop-helix 104 (bHLH104) protein functions as a transcriptional repressor for glucose and abscisic acid signaling in Arabidopsis. Plant Physiol. Biochem., 2019. 136: p. 34-42 [PMID:30639920]
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