PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus

Family

bZIP

Protein Properties

Length: 195aa MW: 22702.2 Da PI: 5.3017

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lj0g3v0279809.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.4	4.7e-16	84	142	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR+RK++ ++eL v L +eN+ L+++l++ ++ ++ +e+ Lj0g3v0279809.1 84 RKQRRMISNRESARRSRLRKQKHLDELWSQVVRLRTENHNLIDKLNHVTESHDRILQEN 142 689*********************************************99988888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-14	80	144	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.461	82	145	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.8E-14	84	142	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.38E-13	84	134	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.6E-11	84	151	No hit	No description
CDD	cd14702	2.86E-19	85	136	No hit	No description
PROSITE pattern	PS00036	0	87	102	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence Send to blast
MFLSETREVP YQAPENQILS QSIFGFLQSD IPNLHLNTLL NQLPNSFFHY ASHQSSPPSS 60 HFPNSNSTSD EADEYQLNKI DIERKQRRMI SNRESARRSR LRKQKHLDEL WSQVVRLRTE 120 NHNLIDKLNH VTESHDRILQ ENARLKEEAS DLCLLLADLQ FGTSFSSTMR DFDEDLCNIP 180 QLSDDESSKQ SLDML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	102	RRSRLRK
2	96	103	RRSRLRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lj0g3v0279809.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003518809.1	3e-76	basic leucine zipper 43
Refseq	XP_028204287.1	3e-76	basic leucine zipper 43-like
Swissprot	Q9FMC2	7e-32	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A445LN25	7e-75	A0A445LN25_GLYSO; Basic leucine zipper 43
TrEMBL	K7K7Z2	7e-75	K7K7Z2_SOYBN; Uncharacterized protein
STRING	GLYMA02G13960.2	1e-75	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1604	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-39	basic leucine-zipper 42

Publications ? help Back to Top
Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]