 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj0g3v0274859.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
WRKY |
| Protein Properties |
Length: 331aa MW: 36161.2 Da PI: 8.7534 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj0g3v0274859.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 76.5 | 3.1e-24 | 147 | 203 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
DgynWrKYGqK+vk+ +rsYYrCt++ C++kk ve +++ ++v ei+Y+++H h+
Lj0g3v0274859.1 147 TDGYNWRKYGQKQVKSPIGSRSYYRCTHSACCAKK-VEFCDHSGHVSEIVYKSQHSHD 203
7********************************98.*********************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MAETATPRLT HSPPPPPSTE LRTSSPPDEA QPNLETLATP SSPPRHHTDH LQGSSTAPEN 60
GKDETEAPAR PPGNEIIVKD AVEEPQVETK NQLQACSTPL SAPSPMVPEQ RLSPPKATSV 120
YVLEVDKTTP SSGTTFSSVP VARSSATDGY NWRKYGQKQV KSPIGSRSYY RCTHSACCAK 180
KVEFCDHSGH VSEIVYKSQH SHDPPHKTNP AKESKSLASK EPNVENTVPK QSVKVLNDSD 240
PSPSPKNPLQ EAPRNPDKKR QNSSDSGNGK VTFKEEDINE PELKRRMKKD DSTCLDSPIK 300
SGKKQKFVVH AAGDVGISGD GYRWRKYGQK M
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Lja.4654 | 0.0 | cell culture| floral bud| flower| pod| root |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP010299 | 0.0 | AP010299.1 Lotus japonicus genomic DNA, chromosome 6, clone: LjT02F19, TM1353, complete sequence. |
| GenBank | AP010300 | 0.0 | AP010300.1 Lotus japonicus genomic DNA, chromosome 6, clone: LjB04H20, BM2019, complete sequence. |
