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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj0g3v0224429.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
GATA |
Protein Properties |
Length: 528aa MW: 58159.3 Da PI: 6.9076 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0224429.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 50 | 4.2e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+
Lj0g3v0224429.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
****************88888***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 528 aa
Download sequence Send
to blast |
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHS RADNVDNDDQ 60 RVSRLKNMSL NKNKEVKFVK RKLNHDNAAS GGFTPDYYQG FQKFVDEDTS NRSSSGSAIS 120 NSESCAQFGG MDASDLTGPA QSVVWDTVVP SKKRTCAGRP KHSSVEKLTK DLCSILHEQQ 180 SYFSATSEEE LLFESETPMV SVEIGHGSIL IRHPNSIARE EESEASSLSV DNKQCLMSEA 240 YSYSGTIPMH SDSSGMNFSS QGVEKVRKSA GHTIQLEQLE RGKSQLEKLD VPGNHVSSLC 300 SIDLNDVVNY EVFSRNLTNE EKQQLLKYLP VVDTAKLPDS LKIMFDSFQF KENFSYFQQL 360 LGEGVFDISL VGAKPEACKT LKRLALSNLS KSKWVECYNS LKKGGNQAGK CIDLGSTAMA 420 SSNVANVKRL RYSQNQNFPE LKTMRSPKRV TIKASCEGKE VAEEGSNCSP RSLFALPGDG 480 SLCMLDSLNF VAESSDQDLL LEVPSNSSFP QAELLHPTSS SWCPCQHQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |