|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj0g3v0212129.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
MYB |
Protein Properties |
Length: 319aa MW: 36208.3 Da PI: 8.6253 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0212129.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 28.7 | 3e-09 | 29 | 74 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
rWT E +l+ +a + + ++ +W+++a++++ g+t ++++ +q
Lj0g3v0212129.1 29 RWTSAENKLFENALAVYDKDmpdRWHRVAEMIP-GKTVEDVIRQYQE 74
9********************************.***********97 PP
|
2 | Myb_DNA-binding | 44.6 | 3.4e-14 | 134 | 178 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky
Lj0g3v0212129.1 134 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 178
8*****************************99************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MKWEMEILSP APFSPNSSWC VEDNNRSTRW TSAENKLFEN ALAVYDKDMP DRWHRVAEMI 60 PGKTVEDVIR QYQELEVDVC NIEAGLVPVP GYTTPISPFT LDWVNTPGYD GFKGSGKRSS 120 SVRTPEQERK KGVPWTEEEH KLFLLGLKKY GKGDWRNISR NFVITRTPTQ VASHAQKYFI 180 RQLSGGKDKR RASIHDITTV NLSETTNNSS PEDTNRSTSP QHSMMLSHQH QYQQQPNSTP 240 ITPRSHFQWN NQPNSGAAMN FNPAHEKVFM SPHGVNSYGV SMQGQNLHKG ALHESSYLGP 300 LSQNMVFQGQ QSSQQYSHA
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |