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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lj0g3v0158379.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
GRAS |
| Protein Properties |
Length: 181aa MW: 20877 Da PI: 6.2754 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj0g3v0158379.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 227.8 | 5e-70 | 1 | 181 | 193 | 374 |
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
+L+++pgEal+Vn+++qlh+++desvs+ +erd++L+lvksl+Pk+v+vveq++++n+++Fl+rf+ea +yysa+f+sl+ +lpres++r++vE
Lj0g3v0158379.1 1 MLSCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTAPFLQRFVEAYKYYSAVFESLDITLPRESQDRMNVE 94
799******************************************************************************************* PP
GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
r++l+r+ivnvvaceg++r+er e ++kWr+r+++aGF+p p+s ++ ++++ l++ + ++ y+++ee g+l +gW+d++L+++SaWr
Lj0g3v0158379.1 95 RQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTPSPMSANVGDEIRKLIKLYCDR-YKIKEEMGALHFGWEDKNLIVASAWR 181
**********************************************************966.*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 181 aa
Download sequence Send
to blast |
MLSCRPGEAL VVNFAFQLHH MPDESVSTVN ERDQLLRLVK SLNPKLVTVV EQDVNTNTAP 60
FLQRFVEAYK YYSAVFESLD ITLPRESQDR MNVERQCLAR DIVNVVACEG EDRIERYEVA 120
GKWRARMTMA GFTPSPMSAN VGDEIRKLIK LYCDRYKIKE EMGALHFGWE DKNLIVASAW 180
R
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015035 | 1e-166 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
