PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0129219.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | G2-like | ||||||||
Protein Properties | Length: 243aa MW: 27186.1 Da PI: 8.0282 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.5 | 2.3e-31 | 117 | 172 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+ Fv+a++qLGG+++AtPk+i+e m+v gLt+++vkSHLQkYRl+ Lj0g3v0129219.1 117 KQRRCWSPELHRLFVDALQQLGGPQVATPKQIREQMQVGGLTNDEVKSHLQKYRLH 172 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 16.319 | 114 | 174 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.2E-28 | 115 | 176 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.57E-18 | 115 | 175 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.5E-26 | 117 | 172 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.8E-8 | 119 | 170 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MKTNSRGNGS FTILKETIDM KNWMSSAQLW SAETKSRSGE DHRFVPHNPI QPWIETSNSE 60 GAFAAFNGNS CVTKTALRDD KEISKVPSLG LMAQAFELHH GNSTSQGQQQ QRQNPRKQRR 120 CWSPELHRLF VDALQQLGGP QVATPKQIRE QMQVGGLTND EVKSHLQKYR LHFRRISTSE 180 DQCGDNNKFS KGNLSQSGSP QGPLYLGGSV NVLSNSVDTE EDDEQSDCHS WKGGIHQQPQ 240 LLV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0129219.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027917691.1 | 1e-101 | transcription factor HHO5-like isoform X1 | ||||
TrEMBL | A0A0L9TG55 | 2e-98 | A0A0L9TG55_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3R4E7 | 2e-98 | A0A0S3R4E7_PHAAN; Uncharacterized protein | ||||
STRING | XP_007155959.1 | 2e-93 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1208 | 34 | 107 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37180.1 | 1e-33 | G2-like family protein |