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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj0g3v0110939.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
DBB |
Protein Properties |
Length: 238aa MW: 26135.6 Da PI: 4.8171 |
Description |
DBB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0110939.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 22.4 | 2.5e-07 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
C+ +e+ +++ C ++ lC++C +e H H++
Lj0g3v0110939.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44
7*****************************65667777765 PP
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2 | zf-B_box | 29 | 2.2e-09 | 53 | 86 | 2 | 35 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35
+ ++C+ +++k + +fC +++ l+C+dC +++H
Lj0g3v0110939.1 53 KLPRCDICQDKAAFIFCVEDRALFCKDCDESIHV 86
789******************************4 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLNCL SNKLPRCDIC 60 QDKAAFIFCV EDRALFCKDC DESIHVAGSL SANHQRFLAT GIRVALGSNC TKGNEKNRVE 120 PSDPKAQEVP VKTPSQQVPS FTSSWAVDDL LELTDFESPD KKQSLEFGEL EWLADAGLFS 180 EQFPHEGLAA AEVPQLSVTH TSSVVSYKAP KSFMSHKKPR IEVIDEDDDE HFTVPDLG
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: High expression in leaves and lower in roots and flowers. |
Functional Description ? help
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Source |
Description |
UniProt | Acts as negative regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation (PubMed:17605755, PubMed:18540109, PubMed:21685177). BBX24/STO and BBX25/STH function as transcriptional corepressors of HY5 activity, leading to the down-regulation of BBX22 expression. BBX24/STO acts additively with BBX25/STH during de-etiolation and the hypocotyl shade avoidance response (PubMed:23624715). Functions as negative regulator of photomorphogenic UV-B responses by interacting with both COP1 and HY5 (PubMed:22410790). May act as a transcription factor in the salt-stress response (PubMed:12909688). {ECO:0000269|PubMed:12909688, ECO:0000269|PubMed:17605755, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:21685177, ECO:0000269|PubMed:22410790, ECO:0000269|PubMed:23624715}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian regulation with a peak before dawn. {ECO:0000269|PubMed:17605755}. |
Publications
? help Back to Top |
- Gangappa SN,Holm M,Botto JF
Molecular interactions of BBX24 and BBX25 with HYH, HY5 HOMOLOG, to modulate Arabidopsis seedling development. Plant Signal Behav, 2014. [PMID:23733077] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Imtiaz M, et al.
Identification and functional characterization of the BBX24 promoter and gene from chrysanthemum in Arabidopsis. Plant Mol. Biol., 2015. 89(1-2): p. 1-19 [PMID:26253592] - Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains. Plant Physiol., 2018. 176(4): p. 2963-2976 [PMID:29439209]
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