|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj0g3v0084249.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
bHLH |
Protein Properties |
Length: 476aa MW: 52775.4 Da PI: 7.3555 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0084249.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 54.1 | 2.8e-17 | 327 | 373 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L++l+P++ K +Ka++Le+A+eY+ksLq
Lj0g3v0084249.1 327 VHNLSERRRRDRINEKMRALQQLIPHS-----SKTDKASMLEEAIEYLKSLQ 373
6*************************8.....6******************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009704 | Biological Process | de-etiolation |
GO:0010161 | Biological Process | red light signaling pathway |
GO:0010244 | Biological Process | response to low fluence blue light stimulus by blue low-fluence system |
GO:0010600 | Biological Process | regulation of auxin biosynthetic process |
GO:0010928 | Biological Process | regulation of auxin mediated signaling pathway |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 476 aa
Download sequence Send
to blast |
MNNSAPDWNF GSDTCLTNQK KPIGMDNDLV EILWQNGQLV LQSQAHKKSV VNSIASRQVN 60 KKFQPTLRTS DPFGMIQDDE TISWIQYPPD HSLEQELCSE LLSELPLCEV ESYRQIRQFG 120 DAKFSKLDDS SMKPSCVQEF SGIPMPAPKF HASDSYQKNK VQNFPHFSAL PIVSTASANA 180 HLRDKIAGNN VSKGEIRECS VMTVGSSHCG SNHIPQDPDI SRASSNGAWT TTLSAEPEAG 240 RDDVHRTIPQ CEKGKPEMLE PTMTSSSGGS GGSSLGKTCS LSTRSQGEKR KGIDVEEQSE 300 DTELKSAVGN KASRRAASAR RNRAAEVHNL SERRRRDRIN EKMRALQQLI PHSSKTDKAS 360 MLEEAIEYLK SLQLQLQVMW MGTGMTPMMF PGIQHYMSQM GMGMATPPFP PIHNPMQLPR 420 GPLDQSIAAS QTPNQSLMSP NPILGAFNYQ NQMQNPAISE QYARYMGYHL MQNASQ
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC235243 | 1e-92 | AC235243.1 Glycine max strain Williams 82 clone GM_WBb0032L23, complete sequence. |