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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj0g3v0056199.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
C2H2 |
Protein Properties |
Length: 242aa MW: 27632.5 Da PI: 8.6729 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj0g3v0056199.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.6 | 0.00084 | 96 | 117 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23
C+ C+++++++ +L H + H
Lj0g3v0056199.1 96 CSVCSRVYPTSRLLSIHVSEeH 117
99***************99877 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MMEVEKPNLE SGFPFWKPLP RMFPPDSPFF APGNLERELL AKQVALEFPE EKLELENWIQ 60 EEAREVFCPI VGCRARLKSL EDFENHYSAR HHSACCSVCS RVYPTSRLLS IHVSEEHDSF 120 FKAKVARGYD VYECLVEGCG LKFKSYTSRK QHLVDKHGFP KSFQFFKKAA PSKKERLKTQ 180 HKQAAHKEDA SGMMEVENAA MDDLVSAVSR LNTSDSTPSS ISFGRRPKGL SFVPRSVQRG 240 NR
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G14140.1 | 1e-106 | zinc ion binding;nucleic acid binding;zinc ion binding |