 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR12G14970.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
WRKY |
| Protein Properties |
Length: 399aa MW: 42574.3 Da PI: 10.6153 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR12G14970.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.2 | 2.6e-31 | 333 | 390 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+
LPERR12G14970.1 333 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEGEHNHT 390
9*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MMSRSPAEAI VQSCKPRRGN FLVWLSSPAA MMEEEVEAAN RAAVESCHRV LALLSQQQDP 60
ALLRSIASET GEACAKFRKV VSLLGNGGGG SGSRGGGAGH ARGRMAGGRS KPAAVLREKG 120
FLDSSSSSSG GAHQLGMMMM SNAATPSTSS AHLRNRIGGG GGLPDSTRGL DLVSSSSKGG 180
HHQFEPPKMV QPLSVQFQFG ATAHRYPFQQ HQQQKLQAEM FKRSNSGISL KFDSPSATGT 240
TMSSAFMSSL SMDGSVASLE GKPPFHLIGG PVASDPVNAH HAPKRRCTGR GEDGSGKCAT 300
TGRCHCSKRR KLRIKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV 360
RGCPARKHVE RCVDDPAMLI VTYEGEHNHT RLPTQSAQT
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK070648 | 0.0 | AK070648.1 Oryza sativa Japonica Group cDNA clone:J023062B16, full insert sequence. |
