 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR12G14590.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
Dof |
| Protein Properties |
Length: 194aa MW: 20986.8 Da PI: 9.9311 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR12G14590.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 110.8 | 6.2e-35 | 33 | 86 | 6 | 59 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
+cprC s++tkfCyynny+++qPr+fC+aCrryWt GG+lrnvP+Gg++rk+
LPERR12G14590.1 33 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRP 86
68*************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MEAPLHQSPF PQQQQTAPAM AMAMVAGGGG GREQCPRCAS RDTKFCYYNN YNTAQPRHFC 60
RACRRYWTLG GSLRNVPIGG STRKRPRPYH PHHRRAINKQ ANYTHNSVIA SSAPPQQEGG 120
SGISVWSALM LGGAPVLEGE QFGFGGGFGR QVMWQAGRVM DQGYSSPPAL WAQELAAVAA 180
PVEMAVTGGV PQLM
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AL954829 | 6e-71 | AL954829.6 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 6e-71 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012620 | 6e-71 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
