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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR12G14550.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 298aa MW: 32713.3 Da PI: 5.6044 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR12G14550.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 34.2 | 4.7e-11 | 226 | 266 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r+RR+riN+++ +L+ l+P+ +K++ +++Le+Av+Y+k Lq
LPERR12G14550.1 226 RKRRERINERLKTLQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 266
9******************97.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MEAGGLIADM SWNVFDLPSH GEESEMMAQL LSAFPIHGEE EGNQELPWFD QSSNPCHYDC 60 NASSSAYSNS NASSFPAPSE YEGYCLSDSN ESIAPHDLSM VQVQGAAEFL SVIPNNYFDL 120 YGNGEQCHKD LDSISGTKKR KHSAEEEFHG QTRGSKCAKK AEPKRAKKAK QTVEKDTSVT 180 IPNGSCCTSD NDSSSSQGAA DAGATSKGKA RAGRGAATDP QSLYARKRRE RINERLKTLQ 240 NLVPNGTKVD ISTMLEEAVH YVKFLQLQIK LLRSDDMWMY APIAYNGMNI GLDLNIHR
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By jasmonic acid (JA) treatment. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL954852 | 2e-93 | AL954852.5 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
GenBank | AP014968 | 2e-93 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |