 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR12G14470.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
G2-like |
| Protein Properties |
Length: 370aa MW: 39464.8 Da PI: 6.9536 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR12G14470.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.7 | 4.8e-32 | 226 | 281 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv a+++LGG++ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
LPERR12G14470.1 226 KARRCWSPELHRRFVAALQRLGGPQTATPKQIRELMKVDGLTNDEVKSHLQKYRLH 281
68****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MMRSSSSAAE PGFFFGGGDM RTLAARTAMA RLAAGAGAGE KSARFEECIR SLEAEKAKME 60
VFRRELPISV HLIADVIEWL KDEVEQRRRT AAPAPAKVTK AKAEEEEEEE EENDKRSWMS 120
SAQLWSCGSH ATVSTSNYSN GKKLQQQKVS NPFMPLTTSP AFAKSPEKSG LAGAGATPLP 180
AVPDLSLSSP AAAIDAPAAP SATSSAVTDI AGAAAQRQQQ QAVQRKARRC WSPELHRRFV 240
AALQRLGGPQ TATPKQIREL MKVDGLTNDE VKSHLQKYRL HTRRASDGGG DHQTAGGGLW 300
PPPPEQYTTS QHSTSQSGSP QGPLQLTVSS SHAVSVTAGD SCDGEGEEED GKSESYSWEM 360
QNGAKASSSS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 9e-15 | 226 | 279 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 9e-15 | 226 | 279 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 9e-15 | 226 | 279 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 9e-15 | 226 | 279 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AL844880 | 1e-76 | AL844880.3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 1e-76 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
