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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR12G03370.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
E2F/DP |
Protein Properties |
Length: 442aa MW: 48190.2 Da PI: 4.3809 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR12G03370.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 83.3 | 2e-26 | 129 | 194 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL+llt+kfl+ll+ ++ giv+ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg
LPERR12G03370.1 129 RYDSSLGLLTKKFLNLLKGAPGGIVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 194
6899******************************...99..****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0008284 | Biological Process | positive regulation of cell proliferation |
GO:0009733 | Biological Process | response to auxin |
GO:0010090 | Biological Process | trichome morphogenesis |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051302 | Biological Process | regulation of cell division |
GO:0051446 | Biological Process | positive regulation of meiotic cell cycle |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MAAAGAGSSE VAARVLLQRY QPFAPPPGEY HQFAAGGGAA ADMTEAVLIR TPLKRKHDRE 60 ENEAAESNDW MMSPGYANAA GSPVPTPLSG KGSKAFAKSK STKGQKSCPQ TPLCATSPGN 120 PVTPVGGCRY DSSLGLLTKK FLNLLKGAPG GIVDLNNAAE TLEVQKRRIY DITNVLEGIG 180 LIEKKLKNNI RWKGIDDSRP GEVSDDMSIL QADIEALSLQ EQSLDQKISE MRDKLRGLTE 240 DENNQKWLYV TEDDIKSLPC FQNQTLIAIK APHGTTLEVP DPDEVNDYPQ RRYRIVLRST 300 MGPIDVYLVS QFEEMSGMET PPRTVQTVSM ENPTTPLAAE SNKAAEAEPN IQDGLIMPCD 360 APSSSQDMGG MMKIVPSELD TDADYWLLSD TGVSITDMWK TAPEVEWEGI EKFNAEDFLE 420 VSTPRQQDKP SSDIMDGDSC IS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK059233 | 0.0 | AK059233.1 Oryza sativa Japonica Group cDNA clone:001-024-E10, full insert sequence. |