PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR12G00990.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 314aa    MW: 34272.7 Da    PI: 5.8133
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR12G00990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.72.7e-09162192233
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT-- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCp 33 
                      +Dgy+WrKYG K+++g++f+ + + C s +C+
  LPERR12G00990.1 162 EDGYQWRKYGEKKIQGTHFTSNDHTCNS-SCT 192
                      8********************9999976.455 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182907.98E-8155189IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.2E-8155190IPR003657WRKY domain
PROSITE profilePS508119.867156219IPR003657WRKY domain
SMARTSM007742.0E-4161215IPR003657WRKY domain
PfamPF031065.7E-7162194IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MAAGAAVGHH SSVVCVATSA FGEEHHQAEA GDQVASVKEV AQVYELIKTH QPLLLLHQNS  60
QHLAYSLLTK AMRALNVALS VMKHLPAPAA AAADQMNPVA SMIKVKAEAT TPANGSATPE  120
ADVADNHVVG KATKRSGAKR RRTTNGEDKP SWFQLTTAAP HEDGYQWRKY GEKKIQGTHF  180
TSNDHTCNSS CTTRITDQNN LGLPLANNSQ LGCPEDDAVC SKMIKQEPQA APWLPPPPLP  240
TISNNPDETL ALHLCQEMLP GTKIYCTYEL DHHQMMQQME TTVVEEALGL EADLDYPYFI  300
DPQLLLLYED LMNC
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR12G00990.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006663747.13e-95PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A0D9XW920.0A0A0D9XW92_9ORYZ; Uncharacterized protein
STRINGLPERR12G00990.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663