PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR11G19460.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 2076aa    MW: 232348 Da    PI: 7.7503
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR11G19460.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.21.5e-1717041763259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY    2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                       dDg++W K G Ke +g+++pr Y+rCt++   gC + k+v+ +++dp +++++Y geH+++
  LPERR11G19460.1 1704 DDGFSWMKNGEKE-HGTKHPRRYFRCTHRetkGCLAMKQVQPTDDDPLILDVIYFGEHTCD 1763
                       8***********9.9*************99999**************************96 PP
2WRKY30.85.8e-10181318532259
                       EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                       ++YYrC+++   gC+++k+v+r++ dp +++++Y+g+H+++
  LPERR11G19460.1 1813 KGYYRCAHRntqGCKATKQVQRTDGDPLILDVIYHGDHTCD 1853
                       68******98889**************************97 PP
3WRKY25.23.3e-0819161938224
                       --SS-EEEEEEE--TT-SS-EEE CS
             WRKY    2 dDgynWrKYGqKevkgsefprsY 24  
                       +Dg++Wr YGqK++ gs++prs 
  LPERR11G19460.1 1916 EDGHSWRMYGQKDIYGSKYPRSK 1938
                       8********************95 PP
4WRKY34.25.1e-11196620072159
                       -EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   21 prsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                        rsYYrC ++   +C+++++v+++++dpk++++ Y+g+H+++
  LPERR11G19460.1 1966 CRSYYRCNHRnsqDCRATRQVQCNDNDPKLFDVLYHGQHTCK 2007
                       6*******998889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF525403.99E-31166338IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009311.0E-24175338IPR002182NB-ARC
Gene3DG3DSA:3.40.50.3001.6E-11181329IPR027417P-loop containing nucleoside triphosphate hydrolase
CDDcd147985.50E-7690818No hitNo description
SuperFamilySSF525401.39E-488631140IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009319.2E-498671165IPR002182NB-ARC
Gene3DG3DSA:3.40.50.3002.7E-108681054IPR027417P-loop containing nucleoside triphosphate hydrolase
PRINTSPR003643.9E-11885900No hitNo description
PRINTSPR003643.9E-11977991No hitNo description
PRINTSPR003643.9E-1110741088No hitNo description
SuperFamilySSF520582.55E-2412051593IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.5E-1912381593IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003643.9E-1113621378No hitNo description
Gene3DG3DSA:2.20.25.809.6E-1717001764IPR003657WRKY domain
SuperFamilySSF1182903.4E-1617011764IPR003657WRKY domain
SMARTSM007747.9E-2417031764IPR003657WRKY domain
PROSITE profilePS5081114.5517041765IPR003657WRKY domain
PfamPF031064.1E-1717041763IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.2E-1217911854IPR003657WRKY domain
SuperFamilySSF1182906.02E-1417991854IPR003657WRKY domain
PROSITE profilePS5081112.28918001855IPR003657WRKY domain
SMARTSM007742.1E-2018051854IPR003657WRKY domain
PfamPF031062.4E-1018121853IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-2119021935IPR003657WRKY domain
SuperFamilySSF1182903.92E-619101937IPR003657WRKY domain
PROSITE profilePS5081114.26319102004IPR003657WRKY domain
SMARTSM007747.2E-2719152008IPR003657WRKY domain
PfamPF031065.6E-519161937IPR003657WRKY domain
PfamPF031062.2E-1019662007IPR003657WRKY domain
SuperFamilySSF1182903.92E-919662008IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-2119672008IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2076 aa     Download sequence    Send to blast
MASAAASAFL EAVMGKLFMV LDKEYSKHRA LEQEIRSLQQ DFRMVAAAMD DQLFSMGRSD  60
ARRSAFARLN AEVMLDLEHN IEDCVDRFMH LLSCKKSDHA GASSSSMVGR VTHGLKKVWS  120
RSSFGDEIQK LKTRLSEARE HVFAGSQLAV SSLSSTAAAV CRAARSPVGI GEPLEELLSL  180
LDEVEGEPEQ MRVISVVGFG GSGKTTLAKA VYDDPRAKGK FQHRAWVAAG GSPETNDGVK  240
GILRDVLQQV CPNDTMDLDC HNLEAALKEY LKDKRYLIVI DDIGADQWRI ISSTFEDKGT  300
GSRIILTTDI QSVANECSHG NGYVYQMKTL GKEDSKKLAF PGFRSPELTI DSGVTIDSGV  360
TAQKRQDWEQ AAKNHPNRPR ILLLGKVDAV ESQEPGRPCA TREKRKISLG QASPEDEPDS  420
SLKRTRLSEP SSSQLQLYTC ARDLPMKAGV LPPAAVITTD ERSPDAAKKN ALKVLFETCF  480
KKLATNIHGF LVGMHLPEHI MKDPTHFRQS THGAGISPLL EELLDLVGEA GAAFDFLQLV  540
HDPANKGCAG AGEIVLAGVA CCESSELVVH GGGYHAEVLL QRVAFLGKAL CWYLFSSSMN  600
SLFFKAFKNA LAAVDSMDGR VQRSSSSLGL QPPTPSLQPS QRLTFAPVYA RISPSECKIR  660
KSSVALIISE NTFMNLVRNT GHGTMVNLPG RLEELLCRRG SMLPKGAEEL PLIKQDLEEI  720
ISILHGHKDT GKLDYHPNDA SMVRKCWMKE VHELSYNIED CVDQYEHNTA AIRYRSGTIR  780
RRQFNRQHGN KTTRLPVKLK QRLWMANKIR EFSLRVQETL QRHSMYKYNN LSCIASTAST  840
ATISAASSRL PSHPGLGGKR GNVGINDNMN KLEGWMIDGE EKLKVVSIVG VGGVGKTTLA  900
NELYRKLRRQ FECRAFVRTS HKPDVRRILI SILLQVRPHQ PLDNWKVHSL ISSIRTHLQD  960
KRLILAVYFI VQKNILEVIF DRYLVIIDDL WATSTWDIIK SALPDGISCS RILITTEIEN  1020
MALQSCGYDI KYVFKMKPLC EDDSRNLFLS TVFGSHSNCP PELMEVSYDI VRKCGGFPLA  1080
VVTVASLLAS QLEKQEQWDY LNKSLGYSLM ANPNQEGMQQ LLNFCYNNLP HHLKACMLYL  1140
SMYQEDYIIW KEDLVNQWIA DGLICAIEGH DKEEISKAYF DELVGRKIIQ PVHIDDNGEV  1200
LSCVVHHMLL DFITYKSVQE IFFIAIDHSQ ATTRFSDKVR RLSIHFGNVE DATPPTNMRL  1260
SQLRTFAFFG VLKLLHLMGD EDSIINFDLA KISEFVRLRY LMVTSNVTLK LPTKMQGLQY  1320
LETLNIDGKI DAIPSDIIQL PGLLHLSLPA KTTLPNGIVH MISLRTLAYF DLSCNSAENL  1380
WSLGELANLR DLRLAYSAIH SDNLNNTMQY LGSILGNLHN VKSITLSPVG SSYADTLHID  1440
CTTRTRISAD GWSSVSPLVP TPVLLQRLDL LPCVCIFSSL PNWIGQLANL CILKIGVREV  1500
TSNDVDVLGG LQALTVLSLY VHTKPAERIV FGNIGFSILK YFKFRCSLAW IKFEVGTMPN  1560
LQKLKLDYNI HRADQHDSIP IGIEHLSRLE EISAKIRVAC TTDDLSKRFA ESALTNAIRM  1620
HSGCPSINIH FVDWTFDGKD VVSVGTREEE HRTLLRQDHI VKEGPTEKSA SLQKDPREGS  1680
HTSVDRRETQ PKQRIQVRVS CTADDGFSWM KNGEKEHGTK HPRRYFRCTH RETKGCLAMK  1740
QVQPTDDDPL ILDVIYFGEH TCDHRSPAKP LKARLIDLIN PPKNALVVKR TMQVRVSSVQ  1800
DVASLDDGYS WRKGYYRCAH RNTQGCKATK QVQRTDGDPL ILDVIYHGDH TCDQTALSDS  1860
QLRSSQPTAS SNLQELLLPG MVLYRPAITE WPPHLAKSHR ETVMKKSKQV TVSSLEDGHS  1920
WRMYGQKDIY GSKYPRSKHL KSTVNGIAAY LLHETDHLIL IKIGSCRSYY RCNHRNSQDC  1980
RATRQVQCND NDPKLFDVLY HGQHTCKQSR NLQLEGQGSS ITCNASTVDE KDATSVANFL  2040
SIDDVLDMGD GDDDVLKDNE TTNTSMADVM TWISIQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C3e-398631437161728Disease resistance RPP13-like protein 4
6j5t_F3e-398631437161728Disease resistance RPP13-like protein 4
6j5t_G3e-398631437161728Disease resistance RPP13-like protein 4
6j5t_L3e-398631437161728Disease resistance RPP13-like protein 4
6j5t_O3e-398631437161728Disease resistance RPP13-like protein 4
6j5u_A3e-398631437161728Disease resistance RPP13-like protein 4
6j5v_A3e-398631437161728Disease resistance RPP13-like protein 4
6j5w_A3e-398631437161728Disease resistance RPP13-like protein 4
6j6i_C3e-398631437161728Disease resistance RPP13-like protein 4
6j6i_F3e-398631437161728Disease resistance RPP13-like protein 4
6j6i_G3e-398631437161728Disease resistance RPP13-like protein 4
6j6i_L3e-398631437161728Disease resistance RPP13-like protein 4
6j6i_O3e-398631437161728Disease resistance RPP13-like protein 4
6s2p_N2e-39863122011347NRC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR11G19460.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025877420.10.0disease resistance protein RGA5-like isoform X5
TrEMBLA0A0D9XVE00.0A0A0D9XVE0_9ORYZ; Uncharacterized protein
STRINGLPERR11G19460.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.15e-20WRKY DNA-binding protein 46