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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR11G13310.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
GRF |
Protein Properties |
Length: 388aa MW: 42376.3 Da PI: 8.835 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR11G13310.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 72 | 6.7e-23 | 142 | 185 | 2 | 45 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
ep+rCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e
LPERR11G13310.1 142 VEPRRCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRSRKHVEG 185
59***************************************996 PP
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2 | QLQ | 58.2 | 2.4e-20 | 89 | 125 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
++FT++Q+++L++Q+l+yK++aan+ vP+ Ll++i++
LPERR11G13310.1 89 GPFTPTQWMELEHQALIYKHIAANVSVPSSLLLPIRR 125
59*********************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MLSSYCGGNG RCDEQGGQQQ DGFLVREARA SPPPHPSSSS FLGSTRSSGR GGQMLSFSPN 60 ETAVCLSCDG GFGLSSGGSM QGVLARVRGP FTPTQWMELE HQALIYKHIA ANVSVPSSLL 120 LPIRRSLHPW GWGSFPPGCA DVEPRRCRRT DGKKWRCSRD AVGDQKYCER HINRGRHRSR 180 KHVEGRKATL TIAEPPMVIA SGVSSRSYNV ARQKQVKTSA TNVTDPFSRQ SNRKFLEKQN 240 AVDQLSPMDS FDFSSTQSSP NYDNVALSPL NLHHDHDESY IGQGAASSSE KGNMLHESRL 300 TVSKETLDDG PLGEVFKRKN CELSSANILN DKWTEGPNSH CPAGILQMAT KFNSMSSSNT 360 VNGGGTALEN RITDNGYLMY PHIVSTLL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK103055 | 0.0 | AK103055.1 Oryza sativa Japonica Group cDNA clone:J033117J15, full insert sequence. |