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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
LPERR11G01330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
MYB |
| Protein Properties |
Length: 313aa MW: 34731.1 Da PI: 6.1192 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR11G01330.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 41.1 | 4e-13 | 14 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.............TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.............kgRtlkqcksrwqkyl 48
+g+WT+eEd +lv +++++G+g+W++++ + R+ k+c++rw +yl
LPERR11G01330.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPINTDesmaidelklhagLMRCSKSCRLRWTNYL 74
79****************************9999*************************97 PP
|
| 2 | Myb_DNA-binding | 45.1 | 2.3e-14 | 80 | 125 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+ E+ +v++ +lG++ W++Ia++++ Rt++++k++w+++l
LPERR11G01330.1 80 RGNFTAHEEGMIVHLQSLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 125
89********************.*********.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MGRPPCCDKE GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PINTDESMAI DELKLHAGLM 60
RCSKSCRLRW TNYLRPGIKR GNFTAHEEGM IVHLQSLLGN RWAAIASYLP QRTDNDIKNY 120
WNTHLKKKLA VANSTNSISS GNNRHPIFAT GSSNNQPEIT QMAAIARRSP FADCPSSSYA 180
SSMDNISKLL DGFMKTTSPS PPPPPLQHYD VGYDDVKPAV ENPLMSFDCM SGTGGGEMDC 240
FDVYHHHQQQ PASSFMDQYG GYGGYGEESK KMMNHQAPPL SSIEKWLFDE AAAEQVADLM 300
DLSDGCCSVP MMF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light). {ECO:0000269|PubMed:22018045}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by abscisic acid (ABA) and osmotic stress (salt stress). {ECO:0000269|PubMed:22018045}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC123525 | 4e-98 | AC123525.2 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence. |
| GenBank | AP014967 | 4e-98 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012619 | 4e-98 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |
| GenBank | CP012620 | 4e-98 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
