 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR11G00400.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
G2-like |
| Protein Properties |
Length: 334aa MW: 37006.8 Da PI: 7.5824 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR11G00400.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.2 | 1.3e-31 | 61 | 114 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH++Fv+av++LGG+++AtPk +l+lm+v gL++ hvkSHLQ+YR+
LPERR11G00400.1 61 PRLRWTPELHHCFVRAVDRLGGQDRATPKLVLQLMNVRGLSIGHVKSHLQMYRS 114
9****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MGKKEEEEGS DQSNTDGGGA PAANNNNWSS TTSTSTVEEE EGQQGERSSS SVRPYVRSKN 60
PRLRWTPELH HCFVRAVDRL GGQDRATPKL VLQLMNVRGL SIGHVKSHLQ MYRSKKIDES 120
GQVIVGGCSW RSDEQQQQYH HLQMQGGHGG QAYNVGHLSL PAALHQHHRH ITAGAGTTVL 180
QSRFGNAWSP WRCHGHGSYP WLRAGHHLPV GSKPYYPPAA EAESPFHSSD RYVARAPSSH 240
LEDFVQASSS SRGDHIMNHQ RSILKKIICN EDGNHQEEGA LNLDLTLDIG PRREKRKREC 300
SWKKQEGDHD HTTIAIGGDQ EAESCATGLS LSLF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-17 | 62 | 116 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 62 | 116 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 62 | 116 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 62 | 116 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 291 | 298 | RREKRKRE |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK107297 | 1e-140 | AK107297.1 Oryza sativa Japonica Group cDNA clone:002-126-C05, full insert sequence. |
