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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR10G14070.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 285aa MW: 31533.2 Da PI: 10.1046 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR10G14070.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49.8 | 6.1e-16 | 31 | 76 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hne Er+RRdriN+++ +L++l+P++ K +Ka++L ++++Y+k+Lq
LPERR10G14070.2 31 HNESERKRRDRINQKMKTLQKLVPNS-----SKADKASMLDEVINYLKQLQ 76
*************************8.....7******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0009506 | Cellular Component | plasmodesma |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MCDEEENVVI KGEGAMRSSI STKRSRAAAI HNESERKRRD RINQKMKTLQ KLVPNSSKAD 60 KASMLDEVIN YLKQLQAQVQ VMSRMSSMMM PMGMAMPQLQ MSVMAQMAQM AQFGLSMMNM 120 GHQSGYPGLT PPMMHTPPFH LPVSSWDATA AGDRPPLQPI AGAAASDPFS AFLAAQQNAQ 180 QPPNSMEAYN RMMAMYQKLN QQQDQPSNSR HAPTQIGQES DDFSLCNSTE VAGPFVYTRR 240 RTCRGPRGNS SILGDVLQMG KEKGKRKAPA NVTVSAIHPK YMSYP
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Functional Description ? help
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Source |
Description |
UniProt | Required during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287925 | 1e-141 | AK287925.1 Oryza sativa Japonica Group cDNA, clone: J065218F01, full insert sequence. |