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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR10G14070.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 381aa MW: 40698.9 Da PI: 5.9824 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR10G14070.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49.2 | 9.3e-16 | 201 | 246 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hne Er+RRdriN+++ +L++l+P++ K +Ka++L ++++Y+k+Lq
LPERR10G14070.1 201 HNESERKRRDRINQKMKTLQKLVPNS-----SKADKASMLDEVINYLKQLQ 246
*************************8.....7******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0009506 | Cellular Component | plasmodesma |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MNQCVPSWDL DDVTPPPPQL TAGGAAGNRA VSSGGGGFVP VSEDQSYYEV AELTWEKGNI 60 SSHGLNRPPP PPPFQSIAVA GDRETLEAVV GAAAEEEGKR MSKRARVACA SQGSVAPGGG 120 GESTLPTLDA GSGDDVFTMT TATNNSTSLE LELDKAGSPE TENTSIAGGA KGWHEENVVI 180 KGEGAMRSSI STKRSRAAAI HNESERKRRD RINQKMKTLQ KLVPNSSKAD KASMLDEVIN 240 YLKQLQAQVQ VMSRMSSMMM PMGMAMPQLQ MSVMAQMAQM AQFGLSMMNM GHQSGYPGLT 300 PPMMHTPPFH LPVSSWDATA AGDRPPLQPI AGAAASDPFS AFLAAQQNAQ QPPNSMEAYN 360 RMMAMYQKLN QQQDQPSNSR Q
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287925 | 1e-137 | AK287925.1 Oryza sativa Japonica Group cDNA, clone: J065218F01, full insert sequence. |