 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR10G10860.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
Dof |
| Protein Properties |
Length: 236aa MW: 24220.2 Da PI: 9.1006 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR10G10860.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 103.9 | 9.4e-33 | 76 | 132 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++cprC s+ntkfCyynnys +qPry+CkaCrr+Wt+GG+lr+vPvGggr++ k++
LPERR10G10860.1 76 PRQCPRCGSSNTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNTKRA 132
679***********************************************9988875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MSSPFIASSA SSSAPLSYLT PPRPPPPPLL MGQGYGAVDG GFGVPDTGVD AVNVVAPAVR 60
QSGRHAGHPP LPRPPPRQCP RCGSSNTKFC YYNNYSRTQP RYLCKACRRH WTEGGTLRDV 120
PVGGGRKNTK RAPSAAAKAK AAAASVASSS SATSSFPDIL RQMLFSPAAA TGGGGGYSID 180
MAAWQQMAAF AGTPDQGGVC DVGGVVGGTA AAADCGGVQY WNGWLQDDMP GLDRSC
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK070563 | 1e-91 | AK070563.1 Oryza sativa Japonica Group cDNA clone:J023060H13, full insert sequence. |
| GenBank | AK109091 | 1e-91 | AK109091.1 Oryza sativa Japonica Group cDNA clone:002-155-A04, full insert sequence. |
