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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
LPERR10G03750.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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| Family |
NF-YC |
| Protein Properties |
Length: 350aa MW: 39613.6 Da PI: 5.0101 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR10G03750.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 75.2 | 9.4e-24 | 34 | 132 | 5 | 100 |
NF-YC 5 fw...ekqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95
fw ++qi+ td + +lP +r++++++a + isa+ Pv+++k celfi eltlr+w+ a++++r+ l di +a+ +t+ + fl d+
LPERR10G03750.1 34 FWmwsQEQIDLGTDNWKLTLPTSRLRNVIRARANGMLISADLPVFVTKLCELFIQELTLRAWVFAQSQNRNILLDIDIVNAIVNTESYHFLADV 127
551123458888999999**************************************************************************** PP
NF-YC 96 vprde 100
v r++
LPERR10G03750.1 128 VRRHQ 132
*9875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MSIPANEGME GHEEESTFSR LLLLQQQQRA MLKFWMWSQE QIDLGTDNWK LTLPTSRLRN 60
VIRARANGML ISADLPVFVT KLCELFIQEL TLRAWVFAQS QNRNILLDID IVNAIVNTES 120
YHFLADVVRR HQVAKLTMSN TTVAKRHRPN KMNLSYHHTQ TINVSPLVDY LPFVGISPMA 180
LMGGKGDMVS ITSACDMKKM NNLRSMDSLN VVIDTTSRDA ATVNHQGRTT QPISFKDTCA 240
SLEDNYVVSD PVGHDDITDT GDDDDVNQLW NEEKNYGVHF LGEGNFSKES LLDRSLGGTM 300
KDDALLFSAK DFPLICYTHE EYNSEKDIRD DICSNSSNNA KKEPNKEQTE
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