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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR09G12170.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 300aa MW: 33040 Da PI: 7.2125 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G12170.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 29.6 | 1.3e-09 | 117 | 164 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR+ri +++ L+ l+P + +k Ka iL + ++Y++sLq
LPERR09G12170.1 117 SHSLAERVRRERISERMRMLQALVPGC----DKVTGKALILDEIINYVQSLQ 164
8*************************9....555*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MAGFSHLPQQ MEHGLTNGFL FCHGHGASTT ASAIPEDASL ETSSAVLDTS PKGTASVDKK 60 RKPREEDSAS LNSAHSKEAK ENSRKRGGKK HNMDQMEEEA PQGFIHVRAR RGQATDSHSL 120 AERVRRERIS ERMRMLQALV PGCDKVTGKA LILDEIINYV QSLQNQVEFL SMRIASLSPV 180 LYGFGIDSDS FSDHSQKIEG MFHEAVAIPA SVLNRGSPAQ SHSQAIMDTS NSSPTPYSIQ 240 VQGGNNSLSQ VSIPKHCSQL RLHCVHTFQD NGSYIMQTVG EPRQELFNQL VLNNYMCSFQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK066188 | 0.0 | AK066188.1 Oryza sativa Japonica Group cDNA clone:J013053A18, full insert sequence. |