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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR09G11560.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 369aa MW: 39059.7 Da PI: 6.1098 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G11560.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.7 | 2.4e-09 | 179 | 226 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq
LPERR09G11560.1 179 SHSLAERVRREKISQRMKVLQDLVPGC----NKVVGKALMLDEIINYVQSLQ 226
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MDSDYVTGLL MSAAAAGIDG LGVLDGGGFL ETLCGGPGFA ERAARMCGGG GGGGLFGVAP 60 AAAGNGERGG SREGSSVSDP AWAAHAANAR KRKTPAPATA SASAGKEKVG ELKQPESKKC 120 KVEIKPKVEE EAANDGSVGD RGQKQGGKGK NSKDSKPAAA EPPKDYVHVR ARRGQATDSH 180 SLAERVRREK ISQRMKVLQD LVPGCNKVVG KALMLDEIIN YVQSLQQQVE FLSMKLATVN 240 PQLDFSNLST LLQKDMFQPC GPSVNSVFPL ESAGTAFPFC DQADFFQSFG LGIMESQCTL 300 DLVNTALPHT ASTQYAFQKQ QKDLWEDNTF HYNDEQSQED AVSAPNFDGS LLINSITTAT 360 IAHHHQADA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK059036 | 0.0 | AK059036.1 Oryza sativa Japonica Group cDNA clone:001-021-C10, full insert sequence. |